Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853183.1_cds_XP_016512156.1_24826
CDS Infomation

[gene=LOC107829204] [db_xref=GeneID:107829204] [protein=26S proteasome non-ATPase regulatory subunit 12 homolog A-like] [protein_id=XP_016512156.1] [location=join(47886..47888,47986..48180,57171..57278,57360..57464,57617..57673,57763..57959,59847..59946,60966..61078,63479..63632,63766..63843,64453..64671)] [gbkey=CDS]
Sequence

ATGGAAGGTGATGGGAAATTGGAGGCCCAAATAGAAGCGCTTTTGAACGTAGAGAAGCAG
ATGAGGCAAGCTGGAGATGTTGCCGGAACTAGAAAAGCGGCTACCGATATTCTTCATCTT
TGCTTCGAAGCTCGTGCTTGGAATACTTTAAATGAACAGATTGTTCTCTTGTCTAAGCGC
CGTGGTCAATTGAAACAGGCTGTACAGGCCATGGTCCAACAAGCAATGCAGTATATTGAC
CAGACACCAGATCTTGACACTAAGATAGAGCTCATCAAGACGCTTAACAATGTGTCTGCC
GGAAAGATATATGTCGAAATTGAGAGAGCTCGCTTGATTAAGAAACTCGCCAAGATTAAC
GAAGAACAAGGAAAAATAGCCGAGGCTGCTGATTTGATGCAAGAAGTTGCGGTTGAAACT
TTTGGGGCGATGGCAAAAACTGAGAAGATAGCCTTCATTCTTGAACAAGTTCGTCTATGC
TTAGATCGTCAAGATTATGTTCGTGCTCAAATACTCTCAAGAAAGATCAATCCCAGAGTG
TTTGAAGCTGATCCCTCTAAGGAAAAGAAGAAACCAAAGGAGGGTGAAAATGTGGTTGAG
GAGCCTGCTGCAGATATTCCATCACTATTAGAGTTGAAGCAAATCTACTATCAATTAATG
ATTAGGTATTACTCACATAGCAACGATTACCTTGAAATATGTCGTTGTTATAAGGCTATA
TATGAGATCCCTTCTGTGAAAGAAGACCCAGCACAGTGGATACCGGTTCTGAGGAAAATT
TGCTGGTATTTGGTATTATCTCCCCATGATCCTATGCAATCAAGTCTTCATAACTCAACT
TTGGAGGACAAGAATCTTTCAGAAATCCCTCATTTCAGGCTGCTTTTGAAGCAATTGATT
ACCATGGAGGTCATTCAATGGACTGCTTTATGGAATACTTTCAAGGATGAGTTTGAAAAT
GAAAAGAATATGCCTGGTGGCACTTTGGGTGACAAGGCTGCCGAAGATCTCAGACTGAGA
GTTATAGAGCATAACATCCTTGTCGTCTCAAAATACTACTCGAGAATAACTTTGAAGAGA
CTGGCAGATTTATTGTGCCTCAGTATCCAGGAAACCGAGAAGCATCTATCTGAAATGGTT
GTATCAAAAGCATTGGTTGCTAAGATTGACAGACCTATGGGTGTAGTCTGTTTCCAACCG
GCAAAAGACAGCAATGACATCTTGAATTCATGGGCTTTTAATTTGGAGAAGCTGCTTGAC
CTTGTAGAGAAGAGTTGCCACCAAATCCACAAAGAAACAATGGTACACAAAGCTGCATTA
AAGGCTTGA

Peptide Sequence

PEP ID

XP_016512156.1
PEP Infomation

PREDICTED: 26S proteasome non-ATPase regulatory subunit 12 homolog A-like [Nicotiana tabacum]
Sequence

MEGDGKLEAQIEALLNVEKQMRQAGDVAGTRKAATDILHLCFEARAWNTLNEQIVLLSKR
RGQLKQAVQAMVQQAMQYIDQTPDLDTKIELIKTLNNVSAGKIYVEIERARLIKKLAKIN
EEQGKIAEAADLMQEVAVETFGAMAKTEKIAFILEQVRLCLDRQDYVRAQILSRKINPRV
FEADPSKEKKKPKEGENVVEEPAADIPSLLELKQIYYQLMIRYYSHSNDYLEICRCYKAI
YEIPSVKEDPAQWIPVLRKICWYLVLSPHDPMQSSLHNSTLEDKNLSEIPHFRLLLKQLI
TMEVIQWTALWNTFKDEFENEKNMPGGTLGDKAAEDLRLRVIEHNILVVSKYYSRITLKR
LADLLCLSIQETEKHLSEMVVSKALVAKIDRPMGVVCFQPAKDSNDILNSWAFNLEKLLD
LVEKSCHQIHKETMVHKAALKA

Transcript Sequence

Gene sequence data has not been registered.